17B-E

Rapid infield extraction (Australian Arid Lands Botanic Garden 2)
Researchers
Lyddiard, D & Greatrex, B
(University of New England)
Year
2017
Contact
dane.lyddiard@une.edu.au
Methods


Collection: 
A small sample of leaf material (~0.02g) was collected from plants cultivated at the Australian Arid Lands Botanic Garden (Port Augusta, SA) by staff at the garden.  Specimens were immediately placed in glass vials containing a small volume of MeOH and shipped to the lab where they were filtered and MeOH added to make up to ~ 1.5 mL.  Specimens were then injected into the GC-MS for characterization.

GC–MS:
Agilent GC System 7890A; inert MSD with triple-axis detector 7975C; Agilent HP-5MS column (30 m × 250μm× 0.25μm; He; 50 °C for 0 min, 5 °C/min to 260 °C, hold 2 min). To limit the impact of solvent-related peaks, peaks prior to a retention time of 3.5 min were not considered in analyses.

Analysis:
Spectra were matched to the NIST11 library and a small private Eremophila compound library maintained at the University of New England. The top 10 peaks were selected, and arithmetic (retention) indices (AI) calculated and compared to the NIST Webbook (http://webbook.nist.gov/chemistry/).  An annotation was rejected if the AI (+/-2%) did not match published values for nonpolar column data.  If the quality match of the spectra to the NIST11 or private library was under 80% the annotation was rejected. Where no published AI was available, a compound was accepted if the quality of the spectra match was 90% or over. 

Alkane standards (for AI)

17B-E:127

EremoChem Project
Compound Annotation
GC-MS (MS library search + retention index comparison)


4%


1%


2%


46%


6%


8%


23%

Plant Part
Leaves
Extraction Method
Miniature MeOH Extraction (in field)
Plant Origin
CULTIVATED. Port Augusta, SA, Australia
Chromatogram

GC: HP-5MS; 30 m × 250μm× 0.25μm; He; 50 °C for 0 min, 5 °C/min to 260 °C, hold 2 min.

Chromatogram
Raw Data

17B-E:128

EremoChem Project
subsp. latifolia
Compound Annotation
GC-MS (MS library search + retention index comparison)

AI 1484
Compound 1
AI 1486
AI 1499
AI 2102


2%


5%


1%


2%

Plant Part
Leaves
Extraction Method
Miniature MeOH Extraction (in field)
Plant Origin
CULTIVATED. Port Augusta, SA, Australia
Chromatogram

GC: HP-5MS; 30 m × 250μm× 0.25μm; He; 50 °C for 0 min, 5 °C/min to 260 °C, hold 2 min.

Chromatogram
Raw Data

17B-E:110

EremoChem Project
Compound Annotation
GC-MS (MS library search + retention index comparison)

AI 1422
Compound 1
AI 1484
AI 1499
AI 1724
AI 1843


6%


1%


43%


1%


1%

Plant Part
Leaves
Extraction Method
Miniature MeOH Extraction (in field)
Plant Origin
CULTIVATED. Port Augusta, SA, Australia
Chromatogram

GC: HP-5MS; 30 m × 250μm× 0.25μm; He; 50 °C for 0 min, 5 °C/min to 260 °C, hold 2 min.

Chromatogram
Raw Data

17B-E:112

EremoChem Project
Compound Annotation
GC-MS (MS library search + retention index comparison)

AI 934
Compound 1
AI 1029
AI 1317
AI 1508


14%


7%


10%


10%

Plant Part
Leaves
Extraction Method
Miniature MeOH Extraction (in field)
Plant Origin
CULTIVATED. Port Augusta, SA, Australia
Chromatogram

GC: HP-5MS; 30 m × 250μm× 0.25μm; He; 50 °C for 0 min, 5 °C/min to 260 °C, hold 2 min.

Chromatogram
Raw Data

17B-E:129

EremoChem Project
subsp. elegans
Compound Annotation
GC-MS (MS library search + retention index comparison)

AI 1499
Compound 1


51%

Plant Part
Leaves
Extraction Method
Miniature MeOH Extraction (in field)
Plant Origin
CULTIVATED. Port Augusta, SA, Australia
Chromatogram

GC: HP-5MS; 30 m × 250μm× 0.25μm; He; 50 °C for 0 min, 5 °C/min to 260 °C, hold 2 min.

Chromatogram
Raw Data

17B-E:113

EremoChem Project
subsp. glabra
Compound Annotation
GC-MS (MS library search + retention index comparison)

AI 1927


0%

Plant Part
Leaves
Extraction Method
Miniature MeOH Extraction (in field)
Plant Origin
CULTIVATED. Port Augusta, SA, Australia
Chromatogram

GC: HP-5MS; 30 m × 250μm× 0.25μm; He; 50 °C for 0 min, 5 °C/min to 260 °C, hold 2 min.

Chromatogram
Raw Data

17B-E:116

EremoChem Project
Compound Annotation
GC-MS (MS library search + retention index comparison)

AI 1032
Compound 1
AI 1484
AI 1499


19%


12%


9%

Plant Part
Leaves
Extraction Method
Miniature MeOH Extraction (in field)
Plant Origin
CULTIVATED. Port Augusta, SA, Australia
Chromatogram

GC: HP-5MS; 30 m × 250μm× 0.25μm; He; 50 °C for 0 min, 5 °C/min to 260 °C, hold 2 min.

Chromatogram
Raw Data

17B-E:118

EremoChem Project
Compound Annotation
GC-MS (MS library search + retention index comparison)

AI 933
Compound 1
AI 1439
AI 1646


1%


43%


2%

Plant Part
Leaves
Extraction Method
Miniature MeOH Extraction (in field)
Plant Origin
CULTIVATED. Port Augusta, SA, Australia
Chromatogram

GC: HP-5MS; 30 m × 250μm× 0.25μm; He; 50 °C for 0 min, 5 °C/min to 260 °C, hold 2 min.

Chromatogram
Raw Data

17B-E:130

EremoChem Project
Compound Annotation
GC-MS (MS library search + retention index comparison)


1%


1%


1%


4%

Plant Part
Leaves
Extraction Method
Miniature MeOH Extraction (in field)
Plant Origin
CULTIVATED. Port Augusta, SA, Australia
Chromatogram

GC: HP-5MS; 30 m × 250μm× 0.25μm; He; 50 °C for 0 min, 5 °C/min to 260 °C, hold 2 min.

Chromatogram
Raw Data

17B-E:131

EremoChem Project
Compound Annotation
GC-MS (MS library search + retention index comparison)

AI 1002
Compound 1
AI 1422
AI 1499


17%


9%


54%

Plant Part
Leaves
Extraction Method
Miniature MeOH Extraction (in field)
Plant Origin
CULTIVATED. Port Augusta, SA, Australia
Chromatogram

GC: HP-5MS; 30 m × 250μm× 0.25μm; He; 50 °C for 0 min, 5 °C/min to 260 °C, hold 2 min.

Chromatogram
Raw Data

17B-E:120

EremoChem Project
Compound Annotation
GC-MS (MS library search + retention index comparison)

AI 1490
Compound 1
AI 1755


10%


6%

Plant Part
Leaves
Extraction Method
Miniature MeOH Extraction (in field)
Plant Origin
CULTIVATED. Port Augusta, SA, Australia
Chromatogram

GC: HP-5MS; 30 m × 250μm× 0.25μm; He; 50 °C for 0 min, 5 °C/min to 260 °C, hold 2 min.

Chromatogram
Raw Data

17B-E:121

EremoChem Project
Compound Annotation
GC-MS (MS library search + retention index comparison)

AI 934
Compound 1


8%

Plant Part
Leaves
Extraction Method
Miniature MeOH Extraction (in field)
Plant Origin
CULTIVATED. Port Augusta, SA, Australia
Chromatogram

GC: HP-5MS; 30 m × 250μm× 0.25μm; He; 50 °C for 0 min, 5 °C/min to 260 °C, hold 2 min.

Chromatogram
Raw Data

17B-E:132

EremoChem Project
subsp. lapidensis
Compound Annotation
GC-MS (MS library search + retention index comparison)

AI 934
Compound 1
AI 1100


3%


1%

Plant Part
Leaves
Extraction Method
Miniature MeOH Extraction (in field)
Plant Origin
CULTIVATED. Port Augusta, SA, Australia
Chromatogram

GC: HP-5MS; 30 m × 250μm× 0.25μm; He; 50 °C for 0 min, 5 °C/min to 260 °C, hold 2 min.

Chromatogram
Raw Data

17B-E:122

EremoChem Project
Compound Annotation
GC-MS (MS library search + retention index comparison)

AI 1422
Compound 1
AI 1471
AI 1499
AI 1581
AI 1651
AI 1691
AI 2084


3%


4%


13%


3%


13%


22%


26%

Plant Part
Leaves
Extraction Method
Miniature MeOH Extraction (in field)
Plant Origin
CULTIVATED. Port Augusta, SA, Australia
Chromatogram

GC: HP-5MS; 30 m × 250μm× 0.25μm; He; 50 °C for 0 min, 5 °C/min to 260 °C, hold 2 min.

Chromatogram
Raw Data

17B-E:135

EremoChem Project
subsp. willsii
Compound Annotation
GC-MS (MS library search + retention index comparison)

AI 933
Compound 1
AI 1030
AI 1499
AI 1927
AI 2101


1%


1%


2%


1%


6%

Plant Part
Leaves
Extraction Method
Miniature MeOH Extraction (in field)
Plant Origin
CULTIVATED. Port Augusta, SA, Australia
Chromatogram

GC: HP-5MS; 30 m × 250μm× 0.25μm; He; 50 °C for 0 min, 5 °C/min to 260 °C, hold 2 min.

Chromatogram
Raw Data

17B-E:134

EremoChem Project
subsp. youngii
Compound Annotation
GC-MS (MS library search + retention index comparison)

AI 934
Compound 1
AI 973
AI 977
AI 992
AI 1029
AI 1032
AI 1446
AI 1625


2%


16%


2%


1%


2%


54%


2%


2%

Plant Part
Leaves
Extraction Method
Miniature MeOH Extraction (in field)
Plant Origin
CULTIVATED. Port Augusta, SA, Australia
Chromatogram

GC: HP-5MS; 30 m × 250μm× 0.25μm; He; 50 °C for 0 min, 5 °C/min to 260 °C, hold 2 min.

Chromatogram
Raw Data