18H-E (aged voucher material)

Herbarium voucher extraction (NCW Beadle Herbarium 2)
Researchers
Lyddiard, D & Greatrex, B
(University of New England)
Year
2018
Contact
dane.lyddiard@une.edu.au
Methods


Collection:
A small sample of dried leaf material (~0.02g) was removed from herbarium vouchers maintained at the N.C.W. Beadle Herbarium (University of New England, Armidale) and placed in glass vials containing ~ 1 mL MeOH.  Material was left to extract for 24 h, frozen (~-18 °C) and sonicated for 80 min with gentle heating (~50 °C) before being filtered. Extracts were diluted with further MeOH as necessary.  Batches were injected into the GC-MS in batches for characterization, or frozen until characterization.

GC–MS:
Agilent GC System 7890A; inert MSD with triple-axis detector 7975C; Agilent HP-5MS column (30 m × 250μm× 0.25μm; He; 50 °C for 0 min, 5 °C/min to 260 °C, hold 2 min). To limit the impact of solvent-related peaks, peaks prior to a retention time of 3.5 min were not considered in analyses.

Analysis:
Spectra were matched to the NIST11 library and a small private Eremophila compound library maintained at the University of New England. The top 10 peaks were selected, and arithmetic (retention) indices (AI) calculated and compared to the NIST Webbook (http://webbook.nist.gov/chemistry/).  An annotation was rejected if the AI (+/-2%) did not match published values for nonpolar column data.  If the quality match of the spectra to the NIST11 or private library was under 80% the annotation was rejected. Where no published AI was available, a compound was accepted if the quality of the spectra match was 90% or over. 

Alkane standards (for AI)

18H-E:97

EremoChem Project
Compound Annotation
GC-MS (MS library search + retention index comparison)


2%


9%


21%


3%


15%


13%


17%


2%

Voucher (Herbarium)
NE60467 (NCW Beadle Herbarium)
Plant Part
Leaves
Extraction Method
Miniature MeOH Extraction (herbarium voucher)
Plant Origin
VOUCHER. NCW Beadle Herbarium, Armidale, NSW, Australia
Chromatogram

GC: HP-5MS; 30 m × 250μm× 0.25μm; He; 50 °C for 0 min, 5 °C/min to 260 °C, hold 2 min.

Chromatogram
Raw Data

18H-E:98

EremoChem Project
Compound Annotation
GC-MS (MS library search + retention index comparison)

AI 907
Compound 1
AI 949
AI 1147
AI 1223
AI 1289
AI 1426
AI 1584
AI 2482


3%


8%


5%


13%


14%


8%


3%


4%

Voucher (Herbarium)
NE92541 (NCW Beadle Herbarium)
Plant Part
Leaves
Extraction Method
Miniature MeOH Extraction (herbarium voucher)
Plant Origin
VOUCHER. NCW Beadle Herbarium, Armidale, NSW, Australia
Chromatogram

GC: HP-5MS; 30 m × 250μm× 0.25μm; He; 50 °C for 0 min, 5 °C/min to 260 °C, hold 2 min.

Chromatogram
Raw Data

18H-E:128

EremoChem Project
subsp. latifolia
Compound Annotation
GC-MS (MS library search + retention index comparison)

AI 1316
Compound 1
AI 1584


2%


2%

Voucher (Herbarium)
NE35593 (NCW Beadle Herbarium)
Plant Part
Leaves
Extraction Method
Miniature MeOH Extraction (herbarium voucher)
Plant Origin
VOUCHER. NCW Beadle Herbarium, Armidale, NSW, Australia
Chromatogram

GC: HP-5MS; 30 m × 250μm× 0.25μm; He; 50 °C for 0 min, 5 °C/min to 260 °C, hold 2 min.

Chromatogram
Raw Data

18H-E:107

EremoChem Project
Compound Annotation
GC-MS (MS library search + retention index comparison)

AI 1100
Compound 1
AI 1584
AI 1658


10%


34%


4%

Voucher (Herbarium)
NE96834 (NCW Beadle Herbarium)
Plant Part
Leaves
Extraction Method
Miniature MeOH Extraction (herbarium voucher)
Plant Origin
VOUCHER. NCW Beadle Herbarium, Armidale, NSW, Australia
Chromatogram

GC: HP-5MS; 30 m × 250μm× 0.25μm; He; 50 °C for 0 min, 5 °C/min to 260 °C, hold 2 min.

Chromatogram
Raw Data

18H-E:21

EremoChem Project
Compound Annotation
GC-MS (MS library search + retention index comparison)


3%


15%


3%


46%

Voucher (Herbarium)
NE106080 (NCW Beadle Herbarium)
Plant Part
Leaves
Extraction Method
Miniature MeOH Extraction (herbarium voucher)
Plant Origin
VOUCHER. NCW Beadle Herbarium, Armidale, NSW, Australia
Chromatogram

GC: HP-5MS; 30 m × 250μm× 0.25μm; He; 50 °C for 0 min, 5 °C/min to 260 °C, hold 2 min.

Chromatogram
Raw Data

18H-E:99

EremoChem Project
Compound Annotation
GC-MS (MS library search + retention index comparison)

AI 1503
Compound 1


1%

Voucher (Herbarium)
NE97252 (NCW Beadle Herbarium)
Plant Part
Leaves
Extraction Method
Miniature MeOH Extraction (herbarium voucher)
Plant Origin
VOUCHER. NCW Beadle Herbarium, Armidale, NSW, Australia
Chromatogram

GC: HP-5MS; 30 m × 250μm× 0.25μm; He; 50 °C for 0 min, 5 °C/min to 260 °C, hold 2 min.

Chromatogram
Raw Data

18H-E:101

EremoChem Project
Compound Annotation
GC-MS (MS library search + retention index comparison)


21%


2%


2%


4%


11%


3%

Voucher (Herbarium)
NE93148 (NCW Beadle Herbarium)
Plant Part
Leaves
Extraction Method
Miniature MeOH Extraction (herbarium voucher)
Plant Origin
VOUCHER. NCW Beadle Herbarium, Armidale, NSW, Australia
Chromatogram

GC: HP-5MS; 30 m × 250μm× 0.25μm; He; 50 °C for 0 min, 5 °C/min to 260 °C, hold 2 min.

Chromatogram
Raw Data

18H-E:111

EremoChem Project
Compound Annotation
GC-MS (MS library search + retention index comparison)

AI 934
Compound 1
AI 979
AI 1100
AI 1185
AI 1213
AI 1584


20%


4%


8%


14%


2%


13%

Voucher (Herbarium)
NE60084 (NCW Beadle Herbarium)
Plant Part
Leaves
Extraction Method
Miniature MeOH Extraction (herbarium voucher)
Plant Origin
VOUCHER. NCW Beadle Herbarium, Armidale, NSW, Australia
Chromatogram

GC: HP-5MS; 30 m × 250μm× 0.25μm; He; 50 °C for 0 min, 5 °C/min to 260 °C, hold 2 min.

Chromatogram
Raw Data

18H-E:102

EremoChem Project
subsp. latrobei
Compound Annotation
GC-MS (MS library search + retention index comparison)

AI 934
Compound 1
AI 1584
AI 1646
AI 1843


2%


2%


1%


52%

Voucher (Herbarium)
NE96825 (NCW Beadle Herbarium)
Plant Part
Leaves
Extraction Method
Miniature MeOH Extraction (herbarium voucher)
Plant Origin
VOUCHER. NCW Beadle Herbarium, Armidale, NSW, Australia
Chromatogram

GC: HP-5MS; 30 m × 250μm× 0.25μm; He; 50 °C for 0 min, 5 °C/min to 260 °C, hold 2 min.

Chromatogram
Raw Data

18H-E:137

EremoChem Project
subsp. glabra
Compound Annotation
GC-MS (MS library search + retention index comparison)

AI 934
Compound 1
AI 1030
AI 1958


12%


6%


8%

Voucher (Herbarium)
NE45980 (NCW Beadle Herbarium)
Plant Part
Leaves
Extraction Method
Miniature MeOH Extraction (herbarium voucher)
Plant Origin
VOUCHER. NCW Beadle Herbarium, Armidale, NSW, Australia
Chromatogram

GC: HP-5MS; 30 m × 250μm× 0.25μm; He; 50 °C for 0 min, 5 °C/min to 260 °C, hold 2 min.

Chromatogram
Raw Data

18H-E:103

EremoChem Project
Compound Annotation
GC-MS (MS library search + retention index comparison)

AI 1316
Compound 1


14%

Voucher (Herbarium)
NE81020 (NCW Beadle Herbarium)
Plant Part
Leaves
Extraction Method
Miniature MeOH Extraction (herbarium voucher)
Plant Origin
VOUCHER. NCW Beadle Herbarium, Armidale, NSW, Australia
Chromatogram

GC: HP-5MS; 30 m × 250μm× 0.25μm; He; 50 °C for 0 min, 5 °C/min to 260 °C, hold 2 min.

Chromatogram
Raw Data

18H-E:116

EremoChem Project
Compound Annotation
GC-MS (MS library search + retention index comparison)

AI 1959
Compound 1


1%

Voucher (Herbarium)
NE80902 (NCW Beadle Herbarium)
Plant Part
Leaves
Extraction Method
Miniature MeOH Extraction (herbarium voucher)
Plant Origin
VOUCHER. NCW Beadle Herbarium, Armidale, NSW, Australia
Chromatogram

GC: HP-5MS; 30 m × 250μm× 0.25μm; He; 50 °C for 0 min, 5 °C/min to 260 °C, hold 2 min.

Chromatogram
Raw Data

18H-E:117

EremoChem Project
Compound Annotation
GC-MS (MS library search + retention index comparison)

AI 934
Compound 1
AI 1316
AI 1426
AI 1503
AI 1584


7%


27%


17%


11%


10%

Voucher (Herbarium)
NE102334 (NCW Beadle Herbarium)
Plant Part
Leaves
Extraction Method
Miniature MeOH Extraction (herbarium voucher)
Plant Origin
VOUCHER. NCW Beadle Herbarium, Armidale, NSW, Australia
Chromatogram

GC: HP-5MS; 30 m × 250μm× 0.25μm; He; 50 °C for 0 min, 5 °C/min to 260 °C, hold 2 min.

Chromatogram
Raw Data

18H-E:75

EremoChem Project
Compound Annotation
GC-MS (MS library search + retention index comparison)


4%


7%


5%


4%


3%

Voucher (Herbarium)
NE69633 (NCW Beadle Herbarium)
Plant Part
Leaves
Extraction Method
Miniature MeOH Extraction (herbarium voucher)
Plant Origin
VOUCHER. NCW Beadle Herbarium, Armidale, NSW, Australia
Chromatogram

GC: HP-5MS; 30 m × 250μm× 0.25μm; He; 50 °C for 0 min, 5 °C/min to 260 °C, hold 2 min.

Chromatogram
Raw Data

18H-E:122

EremoChem Project
Compound Annotation
GC-MS (MS library search + retention index comparison)

AI 1316
Compound 1
AI 1584
AI 1652
AI 1693
AI 2092


3%


6%


5%


12%


26%

Voucher (Herbarium)
NE102354 (NCW Beadle Herbarium)
Plant Part
Leaves
Extraction Method
Miniature MeOH Extraction (herbarium voucher)
Plant Origin
VOUCHER. NCW Beadle Herbarium, Armidale, NSW, Australia
Chromatogram

GC: HP-5MS; 30 m × 250μm× 0.25μm; He; 50 °C for 0 min, 5 °C/min to 260 °C, hold 2 min.

Chromatogram
Raw Data

18H-E:126

EremoChem Project
Compound Annotation
GC-MS (MS library search + retention index comparison)

AI 934
Compound 1
AI 1100
AI 1959


6%


4%


3%

Voucher (Herbarium)
NE52099 (NCW Beadle Herbarium)
Plant Part
Leaves
Extraction Method
Miniature MeOH Extraction (herbarium voucher)
Plant Origin
VOUCHER. NCW Beadle Herbarium, Armidale, NSW, Australia
Chromatogram

GC: HP-5MS; 30 m × 250μm× 0.25μm; He; 50 °C for 0 min, 5 °C/min to 260 °C, hold 2 min.

Chromatogram
Raw Data