H-E1 (aged voucher material)

Herbarium voucher extraction (NCW Beadle Herbarium 1)
Researchers
Lyddiard, D & Greatrex, B
(University of New England)
Year
2017
Contact
dane.lyddiard@une.edu.au
Methods


Collection:
A small sample of dried leaf material (~0.02g) was removed from herbarium vouchers maintained at the N.C.W. Beadle Herbarium (University of New England, Armidale) and placed in glass vials containing ~ 1 mL MeOH.  Material was left to extract overnight as a minimum (up to 2 days) and sonicated for 80 min. Extracts were filtered and diluted with further MeOH as necessary.  Batches were injected into the GC-MS in batches for characterization, or frozen until characterization.

GC–MS:
Agilent GC System 7890A; inert MSD with triple-axis detector 7975C; Agilent HP-5MS column (30 m × 250μm× 0.25μm; He; 50 °C for 0 min, 5 °C/min to 260 °C, hold 2 min). To limit the impact of solvent-related peaks, peaks prior to a retention time of 3.5 min were not considered in analyses.

Analysis:
Spectra were matched to the NIST11 library and a small private Eremophila compound library maintained at the University of New England. The top 10 peaks were selected, and arithmetic (retention) indices (AI) calculated and compared to the NIST Webbook (http://webbook.nist.gov/chemistry/).  An annotation was rejected if the AI (+/-2%) did not match published values for nonpolar column data.  If the quality match of the spectra to the NIST11 or private library was under 80% the annotation was rejected. Where no published AI was available, a compound was accepted if the quality of the spectra match was 90% or over. 

Alkane standards (for AI)

H-E1:97

EremoChem Project
Compound Annotation
GC-MS (MS library search + retention index comparison)

AI 934
Compound 1
AI 1025
AI 1029
AI 1032
AI 1100
AI 1157
AI 1192


2%


2%


10%


2%


1%


72%


1%

Voucher (Herbarium)
NE96837 (NCW Beadle Herbarium)
Plant Part
Leaves
Extraction Method
Miniature MeOH Extraction (herbarium voucher)
Plant Origin
VOUCHER. NCW Beadle Herbarium, Armidale, NSW, Australia
Chromatogram

GC: HP-5MS; 30 m × 250μm× 0.25μm; He; 50 °C for 0 min, 5 °C/min to 260 °C, hold 2 min.

Chromatogram
Raw Data

H-E1:98

EremoChem Project
Compound Annotation
GC-MS (MS library search + retention index comparison)

AI 1316
Compound 1
AI 2483


1%


70%

Voucher (Herbarium)
NE93238 (NCW Beadle Herbarium)
Plant Part
Leaves
Extraction Method
Miniature MeOH Extraction (herbarium voucher)
Plant Origin
VOUCHER. NCW Beadle Herbarium, Armidale, NSW, Australia
Chromatogram

GC: HP-5MS; 30 m × 250μm× 0.25μm; He; 50 °C for 0 min, 5 °C/min to 260 °C, hold 2 min.

Chromatogram
Raw Data

H-E1:106

EremoChem Project
subsp. bowmanii
Compound Annotation
GC-MS (MS library search + retention index comparison)
Voucher (Herbarium)
NE41842 (NCW Beadle Herbarium)
Plant Part
Leaves
Extraction Method
Miniature MeOH Extraction (herbarium voucher)
Plant Origin
VOUCHER. NCW Beadle Herbarium, Armidale, NSW, Australia
Chromatogram

GC: HP-5MS; 30 m × 250μm× 0.25μm; He; 50 °C for 0 min, 5 °C/min to 260 °C, hold 2 min.

Chromatogram
Raw Data

H-E1:107

EremoChem Project
Compound Annotation
GC-MS (MS library search + retention index comparison)

AI 1581
Compound 1
AI 1654
AI 1657


13%


12%


16%

Voucher (Herbarium)
NE96835 (NCW Beadle Herbarium)
Plant Part
Leaves
Extraction Method
Miniature MeOH Extraction (herbarium voucher)
Plant Origin
VOUCHER. NCW Beadle Herbarium, Armidale, NSW, Australia
Chromatogram

GC: HP-5MS; 30 m × 250μm× 0.25μm; He; 50 °C for 0 min, 5 °C/min to 260 °C, hold 2 min.

Chromatogram
Raw Data

H-E1:110

EremoChem Project
Compound Annotation
GC-MS (MS library search + retention index comparison)

AI 1101
Compound 1


4%

Voucher (Herbarium)
NE35433 (NCW Beadle Herbarium)
Plant Part
Leaves
Extraction Method
Miniature MeOH Extraction (herbarium voucher)
Plant Origin
VOUCHER. NCW Beadle Herbarium, Armidale, NSW, Australia
Chromatogram

GC: HP-5MS; 30 m × 250μm× 0.25μm; He; 50 °C for 0 min, 5 °C/min to 260 °C, hold 2 min.

Chromatogram
Raw Data

H-E1:21

EremoChem Project
Compound Annotation
GC-MS (MS library search + retention index comparison)


6%


18%


3%


23%


9%

Voucher (Herbarium)
NE103763 (NCW Beadle Herbarium)
Plant Part
Leaves
Extraction Method
Miniature MeOH Extraction (herbarium voucher)
Plant Origin
VOUCHER. NCW Beadle Herbarium, Armidale, NSW, Australia
Chromatogram

GC: HP-5MS; 30 m × 250μm× 0.25μm; He; 50 °C for 0 min, 5 °C/min to 260 °C, hold 2 min.

Chromatogram
Raw Data

H-E1:99

EremoChem Project
Compound Annotation
GC-MS (MS library search + retention index comparison)
Voucher (Herbarium)
NE97257 (NCW Beadle Herbarium)
Plant Part
Leaves
Extraction Method
Miniature MeOH Extraction (herbarium voucher)
Plant Origin
VOUCHER. NCW Beadle Herbarium, Armidale, NSW, Australia
Chromatogram

GC: HP-5MS; 30 m × 250μm× 0.25μm; He; 50 °C for 0 min, 5 °C/min to 260 °C, hold 2 min.

Chromatogram
Raw Data

H-E1:28

EremoChem Project
subsp. divaricata
Compound Annotation
GC-MS (MS library search + retention index comparison)
Voucher (Herbarium)
NE (NCW Beadle Herbarium)
Plant Part
Leaves
Extraction Method
Miniature MeOH Extraction (herbarium voucher)
Plant Origin
VOUCHER. NCW Beadle Herbarium, Armidale, NSW, Australia
Chromatogram

GC: HP-5MS; 30 m × 250μm× 0.25μm; He; 50 °C for 0 min, 5 °C/min to 260 °C, hold 2 min.

Chromatogram
Raw Data

H-E1:101

EremoChem Project
Compound Annotation
GC-MS (MS library search + retention index comparison)


10%


0%


1%


19%


45%

Voucher (Herbarium)
NE100067 (NCW Beadle Herbarium)
Plant Part
Leaves
Extraction Method
Miniature MeOH Extraction (herbarium voucher)
Plant Origin
VOUCHER. NCW Beadle Herbarium, Armidale, NSW, Australia
Chromatogram

GC: HP-5MS; 30 m × 250μm× 0.25μm; He; 50 °C for 0 min, 5 °C/min to 260 °C, hold 2 min.

Chromatogram
Raw Data

H-E1:124

EremoChem Project
subsp. forrestii
Compound Annotation
GC-MS (MS library search + retention index comparison)

AI 947
Compound 1
AI 1100
AI 1317
AI 1581
AI 1840


4%


2%


1%


3%


74%

Voucher (Herbarium)
NE35903 (NCW Beadle Herbarium)
Plant Part
Leaves
Extraction Method
Miniature MeOH Extraction (herbarium voucher)
Plant Origin
VOUCHER. NCW Beadle Herbarium, Armidale, NSW, Australia
Chromatogram

GC: HP-5MS; 30 m × 250μm× 0.25μm; He; 50 °C for 0 min, 5 °C/min to 260 °C, hold 2 min.

Chromatogram
Raw Data

H-E1:111

EremoChem Project
Compound Annotation
GC-MS (MS library search + retention index comparison)

AI 933
Compound 1
AI 1841


1%


7%

Voucher (Herbarium)
NE74654 (NCW Beadle Herbarium)
Plant Part
Leaves
Extraction Method
Miniature MeOH Extraction (herbarium voucher)
Plant Origin
VOUCHER. NCW Beadle Herbarium, Armidale, NSW, Australia
Chromatogram

GC: HP-5MS; 30 m × 250μm× 0.25μm; He; 50 °C for 0 min, 5 °C/min to 260 °C, hold 2 min.

Chromatogram
Raw Data

H-E1:33

EremoChem Project
Compound Annotation
GC-MS (MS library search + retention index comparison)
Voucher (Herbarium)
NE35448 (NCW Beadle Herbarium)
Plant Part
Leaves
Extraction Method
Miniature MeOH Extraction (herbarium voucher)
Plant Origin
VOUCHER. NCW Beadle Herbarium, Armidale, NSW, Australia
Chromatogram

GC: HP-5MS; 30 m × 250μm× 0.25μm; He; 50 °C for 0 min, 5 °C/min to 260 °C, hold 2 min.

Chromatogram
Raw Data

H-E1:112

EremoChem Project
Compound Annotation
GC-MS (MS library search + retention index comparison)

AI 933
Compound 1


1%

Voucher (Herbarium)
NE42642 (NCW Beadle Herbarium)
Plant Part
Leaves
Extraction Method
Miniature MeOH Extraction (herbarium voucher)
Plant Origin
VOUCHER. NCW Beadle Herbarium, Armidale, NSW, Australia
Chromatogram

GC: HP-5MS; 30 m × 250μm× 0.25μm; He; 50 °C for 0 min, 5 °C/min to 260 °C, hold 2 min.

Chromatogram
Raw Data

H-E1:113

EremoChem Project
subsp. glabra
Compound Annotation
GC-MS (MS library search + retention index comparison)

AI 1100
Compound 1


3%

Voucher (Herbarium)
NE67775 (NCW Beadle Herbarium)
Plant Part
Leaves
Extraction Method
Miniature MeOH Extraction (herbarium voucher)
Plant Origin
VOUCHER. NCW Beadle Herbarium, Armidale, NSW, Australia
Chromatogram

GC: HP-5MS; 30 m × 250μm× 0.25μm; He; 50 °C for 0 min, 5 °C/min to 260 °C, hold 2 min.

Chromatogram
Raw Data

H-E1:102

EremoChem Project
subsp. latrobei
Compound Annotation
GC-MS (MS library search + retention index comparison)
Voucher (Herbarium)
NE74637 (NCW Beadle Herbarium)
Plant Part
Leaves
Extraction Method
Miniature MeOH Extraction (herbarium voucher)
Plant Origin
VOUCHER. NCW Beadle Herbarium, Armidale, NSW, Australia
Chromatogram

GC: HP-5MS; 30 m × 250μm× 0.25μm; He; 50 °C for 0 min, 5 °C/min to 260 °C, hold 2 min.

Chromatogram
Raw Data

H-E1:103

EremoChem Project
Compound Annotation
GC-MS (MS library search + retention index comparison)


74%


9%


10%


1%

Voucher (Herbarium)
NE100066 (NCW Beadle Herbarium)
Plant Part
Leaves
Extraction Method
Miniature MeOH Extraction (herbarium voucher)
Plant Origin
VOUCHER. NCW Beadle Herbarium, Armidale, NSW, Australia
Chromatogram

GC: HP-5MS; 30 m × 250μm× 0.25μm; He; 50 °C for 0 min, 5 °C/min to 260 °C, hold 2 min.

Chromatogram
Raw Data

H-E1:136

EremoChem Project
Compound Annotation
GC-MS (MS library search + retention index comparison)
Voucher (Herbarium)
NE45981 (NCW Beadle Herbarium)
Plant Part
Leaves
Extraction Method
Miniature MeOH Extraction (herbarium voucher)
Plant Origin
VOUCHER. NCW Beadle Herbarium, Armidale, NSW, Australia
Chromatogram

GC: HP-5MS; 30 m × 250μm× 0.25μm; He; 50 °C for 0 min, 5 °C/min to 260 °C, hold 2 min.

Chromatogram
Raw Data

H-E1:115

EremoChem Project
Compound Annotation
GC-MS (MS library search + retention index comparison)


8%


4%


9%

Voucher (Herbarium)
NE35880 (NCW Beadle Herbarium)
Plant Part
Leaves
Extraction Method
Miniature MeOH Extraction (herbarium voucher)
Plant Origin
VOUCHER. NCW Beadle Herbarium, Armidale, NSW, Australia
Chromatogram

GC: HP-5MS; 30 m × 250μm× 0.25μm; He; 50 °C for 0 min, 5 °C/min to 260 °C, hold 2 min.

Chromatogram
Raw Data

H-E1:116

EremoChem Project
Compound Annotation
GC-MS (MS library search + retention index comparison)
Voucher (Herbarium)
NE76069 (NCW Beadle Herbarium)
Plant Part
Leaves
Extraction Method
Miniature MeOH Extraction (herbarium voucher)
Plant Origin
VOUCHER. NCW Beadle Herbarium, Armidale, NSW, Australia
Chromatogram

GC: HP-5MS; 30 m × 250μm× 0.25μm; He; 50 °C for 0 min, 5 °C/min to 260 °C, hold 2 min.

Chromatogram
Raw Data

H-E1:117

EremoChem Project
Compound Annotation
GC-MS (MS library search + retention index comparison)

AI 1316
Compound 1


95%

Voucher (Herbarium)
NE102351 (NCW Beadle Herbarium)
Plant Part
Leaves
Extraction Method
Miniature MeOH Extraction (herbarium voucher)
Plant Origin
VOUCHER. NCW Beadle Herbarium, Armidale, NSW, Australia
Chromatogram

GC: HP-5MS; 30 m × 250μm× 0.25μm; He; 50 °C for 0 min, 5 °C/min to 260 °C, hold 2 min.

Chromatogram
Raw Data

H-E1:118

EremoChem Project
Compound Annotation
GC-MS (MS library search + retention index comparison)

AI 933
Compound 1
AI 1221
AI 1315
AI 1442
AI 1840


2%


3%


31%


26%


5%

Voucher (Herbarium)
NE96826 (NCW Beadle Herbarium)
Plant Part
Leaves
Extraction Method
Miniature MeOH Extraction (herbarium voucher)
Plant Origin
VOUCHER. NCW Beadle Herbarium, Armidale, NSW, Australia
Chromatogram

GC: HP-5MS; 30 m × 250μm× 0.25μm; He; 50 °C for 0 min, 5 °C/min to 260 °C, hold 2 min.

Chromatogram
Raw Data

H-E1:105

EremoChem Project
subsp. oppositifolia
Compound Annotation
GC-MS (MS library search + retention index comparison)
Voucher (Herbarium)
NE35763 (NCW Beadle Herbarium)
Plant Part
Leaves
Extraction Method
Miniature MeOH Extraction (herbarium voucher)
Plant Origin
VOUCHER. NCW Beadle Herbarium, Armidale, NSW, Australia
Chromatogram

GC: HP-5MS; 30 m × 250μm× 0.25μm; He; 50 °C for 0 min, 5 °C/min to 260 °C, hold 2 min.

Chromatogram
Raw Data

H-E1:64

EremoChem Project
Compound Annotation
GC-MS (MS library search + retention index comparison)

AI 1315
Compound 1
AI 2568


3%


1%

Voucher (Herbarium)
NE51640 (NCW Beadle Herbarium)
Plant Part
Leaves
Extraction Method
Miniature MeOH Extraction (herbarium voucher)
Plant Origin
VOUCHER. NCW Beadle Herbarium, Armidale, NSW, Australia
Chromatogram

GC: HP-5MS; 30 m × 250μm× 0.25μm; He; 50 °C for 0 min, 5 °C/min to 260 °C, hold 2 min.

Chromatogram
Raw Data

H-E1:119

EremoChem Project
Compound Annotation
GC-MS (MS library search + retention index comparison)

AI 1318
Compound 1


3%

Voucher (Herbarium)
NE25640 (NCW Beadle Herbarium)
Plant Part
Leaves
Extraction Method
Miniature MeOH Extraction (herbarium voucher)
Plant Origin
VOUCHER. NCW Beadle Herbarium, Armidale, NSW, Australia
Chromatogram

GC: HP-5MS; 30 m × 250μm× 0.25μm; He; 50 °C for 0 min, 5 °C/min to 260 °C, hold 2 min.

Chromatogram
Raw Data

H-E1:75

EremoChem Project
Compound Annotation
GC-MS (MS library search + retention index comparison)
Voucher (Herbarium)
NE96836 (NCW Beadle Herbarium)
Plant Part
Leaves
Extraction Method
Miniature MeOH Extraction (herbarium voucher)
Plant Origin
VOUCHER. NCW Beadle Herbarium, Armidale, NSW, Australia
Chromatogram

GC: HP-5MS; 30 m × 250μm× 0.25μm; He; 50 °C for 0 min, 5 °C/min to 260 °C, hold 2 min.

Chromatogram
Raw Data

H-E1:121

EremoChem Project
Compound Annotation
GC-MS (MS library search + retention index comparison)

AI 2836
Compound 1


57%

Voucher (Herbarium)
NE98388 (NCW Beadle Herbarium)
Plant Part
Leaves
Extraction Method
Miniature MeOH Extraction (herbarium voucher)
Plant Origin
VOUCHER. NCW Beadle Herbarium, Armidale, NSW, Australia
Chromatogram

GC: HP-5MS; 30 m × 250μm× 0.25μm; He; 50 °C for 0 min, 5 °C/min to 260 °C, hold 2 min.

Chromatogram
Raw Data

H-E1:122

EremoChem Project
Compound Annotation
GC-MS (MS library search + retention index comparison)

AI 1547
Compound 1
AI 1651
AI 2084


1%


4%


72%

Voucher (Herbarium)
NE100065 (NCW Beadle Herbarium)
Plant Part
Leaves
Extraction Method
Miniature MeOH Extraction (herbarium voucher)
Plant Origin
VOUCHER. NCW Beadle Herbarium, Armidale, NSW, Australia
Chromatogram

GC: HP-5MS; 30 m × 250μm× 0.25μm; He; 50 °C for 0 min, 5 °C/min to 260 °C, hold 2 min.

Chromatogram
Raw Data

H-E1:123

EremoChem Project
Compound Annotation
GC-MS (MS library search + retention index comparison)

AI 1655
Compound 1


19%

Voucher (Herbarium)
NE35900 (NCW Beadle Herbarium)
Plant Part
Leaves
Extraction Method
Miniature MeOH Extraction (herbarium voucher)
Plant Origin
VOUCHER. NCW Beadle Herbarium, Armidale, NSW, Australia
Chromatogram

GC: HP-5MS; 30 m × 250μm× 0.25μm; He; 50 °C for 0 min, 5 °C/min to 260 °C, hold 2 min.

Chromatogram
Raw Data

H-E1:125

EremoChem Project
subsp. verrucosa
Compound Annotation
GC-MS (MS library search + retention index comparison)

AI 933
Compound 1
AI 977
AI 1032
AI 1499
AI 1581


8%


5%


2%


4%


4%

Voucher (Herbarium)
NE60085 (NCW Beadle Herbarium)
Plant Part
Leaves
Extraction Method
Miniature MeOH Extraction (herbarium voucher)
Plant Origin
VOUCHER. NCW Beadle Herbarium, Armidale, NSW, Australia
Chromatogram

GC: HP-5MS; 30 m × 250μm× 0.25μm; He; 50 °C for 0 min, 5 °C/min to 260 °C, hold 2 min.

Chromatogram
Raw Data

H-E1:126

EremoChem Project
Compound Annotation
GC-MS (MS library search + retention index comparison)
Voucher (Herbarium)
NE90372 (NCW Beadle Herbarium)
Plant Part
Leaves
Extraction Method
Miniature MeOH Extraction (herbarium voucher)
Plant Origin
VOUCHER. NCW Beadle Herbarium, Armidale, NSW, Australia
Chromatogram

GC: HP-5MS; 30 m × 250μm× 0.25μm; He; 50 °C for 0 min, 5 °C/min to 260 °C, hold 2 min.

Chromatogram
Raw Data